BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F04SP1|AL428085
(1018 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1722 713 0.0
3x_Contig1384 403 e-112
3x_Contig1799 111 2e-24
>3x_Contig1722
Length = 17718
Score = 713 bits (359), Expect = 0.0
Identities = 412/429 (96%), Gaps = 4/429 (0%)
Strand = Plus / Plus
Query: 591 ttctgtagtgatatgctttggatgatagttgattgattaatcgcctgatgagggatcgtt 650
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 ttctgttgtgatatggtttggatgatagttgattgattaatcgcctgatgagggatcgtt 1792
Query: 651 gatatcaaacaatataacgaatatmatataatamtctatttagttagatcgttgagttta 710
|||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||
Sbjct: 1793 gatatcaaacaatataacgaatataatataat---ctatttagctagatcgttgagtata 1849
Query: 711 tgcgtccttgctcttctttctcttgttgcatccaacctccccaagaggtcgcaacatagc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1850 tgcgtccttgctcttctttctcttgttgcatccaacctccccaagaggtcgcaacatagc 1909
Query: 771 tcagccttttatactcgacttatatactcggatggtcgtcagacttcgtcatggcaactc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1910 tcagccttttatactcgacttatatactcggatggtcgtcagacttcgtcatggcaactc 1969
Query: 831 gttgcctccatgcccttgtaggtcctgtgcagctaccgtcctccacgcgcactcaagacc 890
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1970 attgcctccatgcccttgtaggttttgtgcagctaccgtcctccacgcgcactcaagacc 2029
Query: 891 atcacgtgacagtctatgatccatctatgccatccctctggata-cacaggatccatatg 949
|||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||
Sbjct: 2030 atcacgtgaccgtctatgatccatctaggtcatccctctggataccacaggatccatatg 2089
Query: 950 cccagtcactgacgtcttggaactctgccgtgtgctggctagcccmcatgacctctcgtc 1009
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 2090 cccagtcactgacgtcttggaactctgccgtgtgctggctagctcacatgacctctcgtc 2149
Query: 1010 tggcttgtc 1018
|||||||||
Sbjct: 2150 tggcttgtc 2158
>3x_Contig1384
Length = 9372
Score = 403 bits (203), Expect = e-112
Identities = 240/251 (95%), Gaps = 4/251 (1%)
Strand = Plus / Minus
Query: 598 gtgatatgctttggatgatagttgattgattaatcgcctgatgagggatcgttgatatca 657
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgatatggtttggatgatagttgattgattaatcgcctgatgagggatcgttgatatca 188
Query: 658 aacaatataacgaatatmatataatamtctatttagttagatcgttgagtttatgcgtcc 717
||||||||||||||||| ||| ||| |||||||| ||||||||||||| |||||||||
Sbjct: 187 aacaatataacgaatataataaaat---ctatttagctagatcgttgagtatatgcgtcc 131
Query: 718 ttgctcttctttctcttgttgcatccaacctccccaagaggtcgcaacatagctcagcct 777
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttgctctgctttctcttgttgcatccaacctccccaagaggtcgcaacatagctcagcct 71
Query: 778 tttatactcgacttatatactcggatggtcgtcagacttcgtcatggcaactcgttgcct 837
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 70 tttatactcgacttatatactcggatggtcgtcaga-ttcgtcatggcaactcattgcct 12
Query: 838 ccatgcccttg 848
|||||||||||
Sbjct: 11 ccatgcccttg 1
>3x_Contig1799
Length = 39855
Score = 111 bits (56), Expect = 2e-24
Identities = 101/114 (88%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 892 tcacgtgacagtctatgatccatctatgccatccct-ctggatac-acaggatccatatg 949
||||||||| ||| ||||||||||| ||| ||||| |||||||| ||||||||||||||
Sbjct: 29761 tcacgtgaccctctttgatccatctaggccttcccttctggataccacaggatccatatg 29702
Query: 950 cccagtcactgacgtcttggaactctgccgtgtgctggctagcccmcatgacct 1003
|||||||||||||||||||||||||||||| | | ||| |||| | ||||||||
Sbjct: 29701 cccagtcactgacgtcttggaactctgccgagcgttggatagctcacatgacct 29648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6713
Number of Sequences: 1807
Number of extensions: 6713
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 3
length of query: 1018
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1002
effective length of database: 10,329,639
effective search space: 10350298278
effective search space used: 10350298278
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)